Use Cases
Real-world examples of what you can do with PlanDrop
🧬
Bioinformatics
RNA-seq, scRNA-seq, Variant Calling
Example Tasks
- • Run DESeq2 differential expression with proper normalization
- • Process FASTQ files through STAR alignment pipeline
- • Analyze single-cell data with Scanpy or Seurat
- • Call variants with GATK best practices workflow
- • Generate publication-ready plots with ggplot2
Recommended Profile
BioinformaticsAvailable Tools
samtools STAR bedtools conda R python
🤖
Machine Learning
Training, Experiments, GPU Workflows
Example Tasks
- • Train a classifier on your dataset with cross-validation
- • Fine-tune a transformer model with custom data
- • Run hyperparameter sweeps with Weights & Biases
- • Debug CUDA out-of-memory errors
- • Convert model formats (PyTorch → ONNX → TensorRT)
Recommended Profile
ML/Deep LearningAvailable Tools
python pip nvidia-smi jupyter wandb docker
📊
Data Analysis
ETL, Reports, Visualizations
Example Tasks
- • Clean and transform messy CSV data
- • Generate summary statistics and visualizations
- • Build automated reporting pipelines
- • Query databases and export results
- • Create interactive dashboards
Recommended Profile
Edit Files OnlyAvailable Tools
python pandas matplotlib SQL
🛠️
DevOps & Infrastructure
Scripts, Automation, Debugging
Example Tasks
- • Write and debug shell scripts
- • Parse log files and extract patterns
- • Set up cron jobs and automation
- • Debug failed deployments
- • Manage Docker containers
Recommended Profile
Full AccessAvailable Tools
bash docker git systemd cron
📝
Research & Writing
Literature Review, Documentation
Example Tasks
- • Summarize research papers in a directory
- • Generate methods sections from code
- • Create README documentation
- • Format references in BibTeX
- • Draft grant application sections
Recommended Profile
Plan OnlyAvailable Tools
Read files Suggest changes
What will you build?
Get started with PlanDrop and bring Claude Code to your workflow.